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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919854.1_cds_XP_016469056.1_61628
CDS Infomation

[gene=LOC107791485] [db_xref=GeneID:107791485] [protein=2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform X2] [protein_id=XP_016469056.1] [location=join(13136..13164,13249..13321,13987..14152,14245..14343,14757..14854,14941..15134,15477..15604,15880..16259,16472..16686,16825..16954)] [gbkey=CDS]
Sequence

ATGAATTTATATCTGGGAATAGTCATAAGTGATCTGTACTTGGAGTGGTTACTCGCAGTG
GCGTATGTAGGAGGAATTACTGCACCTTTCAATTACCGTTGGAGCTTGGAAGAAGCAAGA
ACAGCTCTTCAGGTAGCAAAGCCAACAATGTTGGTCCACGACGCAACCTGTAATTTCTGG
AAGTTCGAGTCCTATGATGATTCTGTGCCTTCTCTGAGGTGGAAAGTCCTAATGGATAAT
CCTAGTGTGGTTAATAGCACTAAGATTGGATTAACTACTAAACAGCTTAAACGAAGTTTT
AAAAGGCATTTAGTAGCAGACTGCCTGTGGGCACCTCAGGAAGCTGCTATAATATGCTTT
ACCTCAGGAACCACCGGGAGGCCAAAGGGAGTTACCATAAGCCATTCAGCTTTGGTGGTG
CAATCCCTTGCAAAAATTGCGATTGTTGGTTACGGTGAGGATGATGTCTATTTACACACT
GCACCATTGTGCCACATTGGTGGTATATCATCAGCCTTGGCCATGTTAATGGCAGGAGGT
TGTCATATTCTACTACCAAAGTTTGAAGCTAAATTGGCTATTGAATCCATAGAGCAGCAT
AATGTTACTTCTTTTATCACAGTTCCAGCTATGATGTCTGATGTAATCTCTTTTTATAGG
ACAAAGCACATATCTCTAGGGTCCAAATCTGTGAGGAAGATTCTTAATGGAGCTGGGGGT
CTTTCATCTGATCTTATCAAAAATGCGATTGAGATTTTCCCAAGGGCTAAAATTCTTTCA
GCCTATGGAATGACCGAGGCATGTTCTTCTCTAACTTTCATGACTCTTTATGACCCGACG
AAAGAGAGTTGTGTCCAGAATTCTTGTGCCAATAGCTCCAATTTGGCACATAAACCAGAT
GGTATCTGTGTTGGAAAGCCTGCTCCACATATTGAAATAAGGATTGCTGGGGATGATTCA
TCTTGTATAGGGAGGATTTTGACACGAGGACCCCATGTAATGCTTGGATACTGGGGTCAA
ATGCCAAGCAAGAATTCTTCTCCAACTGATGAAAGTTGGCTTGACACTGGTGATATAGGG
CATATAGATGATTGTGGAAATGTCTGGCTCATTGGGCGTTTGAAGGGTCGAATAAAGAGT
GGGGGCGAGAATGTTTATCCGGAAGAGGTGGAAGCTGTCTTATCCCAACATCCAGGGATA
TCTGCTAGTGTTGTTATTGGGCTTCCTGACTCTCGCTTGACCGAGATGGTCATTGCCTCT
ATTAGGCTCAAAGACAATTGGCAGTGGACAGATTCCAGTTCTGATCATCCGGTTAACAAG
AAGGAGCATTGTCTTTCCAGCACTCTCCTCCAGAACTTCTGTAGAGCGAAAAATTTGACG
GGGTTCAAAATACCCAAGAATTTTGTATTGTGGAAAAATCAATTTCCAGTGACAACAACA
GGGAAATTAAGAAGAGATCAAGTCAGAGCAGAACTTATGTCTTATAAGCAGTTACAGCCC
AGCAGACTGTGA

Peptide Sequence

PEP ID

XP_016469056.1
PEP Infomation

PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform X2 [Nicotiana tabacum]
Sequence

MNLYLGIVISDLYLEWLLAVAYVGGITAPFNYRWSLEEARTALQVAKPTMLVHDATCNFW
KFESYDDSVPSLRWKVLMDNPSVVNSTKIGLTTKQLKRSFKRHLVADCLWAPQEAAIICF
TSGTTGRPKGVTISHSALVVQSLAKIAIVGYGEDDVYLHTAPLCHIGGISSALAMLMAGG
CHILLPKFEAKLAIESIEQHNVTSFITVPAMMSDVISFYRTKHISLGSKSVRKILNGAGG
LSSDLIKNAIEIFPRAKILSAYGMTEACSSLTFMTLYDPTKESCVQNSCANSSNLAHKPD
GICVGKPAPHIEIRIAGDDSSCIGRILTRGPHVMLGYWGQMPSKNSSPTDESWLDTGDIG
HIDDCGNVWLIGRLKGRIKSGGENVYPEEVEAVLSQHPGISASVVIGLPDSRLTEMVIAS
IRLKDNWQWTDSSSDHPVNKKEHCLSSTLLQNFCRAKNLTGFKIPKNFVLWKNQFPVTTT
GKLRRDQVRAELMSYKQLQPSRL

Transcript Sequence

Gene sequence data has not been registered.